Skip to main content

Table 4 Interaction between drugs 1–9(a–f) and target proteins (4y72 and 2ra3) and their docking scores

From: New thiazole, thiophene and 2-pyridone compounds incorporating dimethylaniline moiety: synthesis, cytotoxicity, ADME and molecular docking studies

Cpd no.

(PDB ID: 4y72)

(PDB ID: 2ra3)

S (energy binding score) (Kcal/mol)

RMSD

Distance (A)

Binding interaction

S (energy binding score) (Kcal/mol)

RMSD

Distance (A)

Binding interaction

Ligand

Receptor

Type

Ligand

Receptor

Type

5

− 7.9160

1.0834

3.03

N-Amino

Asp 86

H-donor

− 6.8706

0.9802

2.89

O-Amide

Gly 193

H-acceptor

         

2.99

O-Carbonyl

Lys 60

H-acceptor

         

4.64

Benzene ring

Phe 41

π–H

8f

− 7.9504

1.3730

3.51

N-Nitrile

Lys 130

H-acceptor

− 7.2367

1.3140

3.57

Cl-atom

Asp 189

H-donor

   

3.88

Benzene ring

Ile 10

π–H

  

4.06

C-Benzene ring

His 57

H–π

   

3.95

Benzene ring

Glu 12

π–H

  

3.95

Benzene ring

His 57

π–H

9d

− 8.1223

1.5557

3.17

N-Amino

Gln 132

H-donor

− 6.1324

1.2871

3.05

N-Nitrile

Asn 34

H-acceptor

   

2.94

N-Amide

Ser 84

H-donor

  

3.68

Benzene ring

Gly 38

π–H

   

3.38

N-Dimethylamino Benzene ring

Lys 130

H-acceptor

      
   

4.16

 

Gly 11

π–H

      

9f

− 8.0945

1.4239

4.06

Benzene ring 6-benzene ring

Ile 10

π–H

− 5.9004

0.9566

3.07

N-Nitrile

Trp 237

H-acceptor

   

4.45

Benzene ring

Thr 14

π–H

  

3.64

Benzene ring

Pro 92

π–H

   

4.02

 

Lys 130

π–cation

      

Dox

− 8.8931

1.4144

2.72

O-Hydroxy

Asn 133

H-donor

− 6.2060

1.4534

3.00

N-Amino

Arg 96

H-donor

         

3.67

Benzene ring

His 57

π–H

         

4.53

Quninone ring

Gln 192

π–H