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Table 2 The inter-features of the valid pharmacophore model: constraint distances and angles

From: Lead generation of UPPS inhibitors targeting MRSA: Using 3D-QSAR pharmacophore modeling, virtual screening, molecular docking, and molecular dynamic simulations

Features

Constraint Distance (Ã…)

HYDROPHOBIC_3.11: HBA_1.21

HYDROPHOBIC_3.11: RING_AROMATIC_4.21

HYDROPHOBIC_3.11: HYDROPHOBIC_2.11

RING_AROMATIC_4.21: HYDROPHOBIC_2.11

RING_AROMATIC_4.21: HBA_1.21

HBA_1.21: HYDROPHOBIC_2.11

5.515

11.065

15.144

4.347

6.089

9.314

 

Constraint Angles (°)

HYDROPHOBIC_3.11, HBA_1.21, RING_AROMATIC_4.21

RING_AROMATIC_4.21, HBA_1.21, HYDROPHOBIC_2.11

HYDROPHOBIC_2.11, RING_AROMATIC_4.21, HYDROPHOBIC_3.11

18.43

23.68

6.67